Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015795857.1_cds_XP_016446256.1_4037
CDS Infomation

[gene=LOC107771410] [db_xref=GeneID:107771410] [protein=patatin-like protein 3] [protein_id=XP_016446256.1] [location=complement(join(22794..23018,23287..23589,23829..23990,24097..24280,24376..24557,25363..25542))] [gbkey=CDS]
Sequence

ATGGGGAGAATAGCTCTTGTAGCTGCAGCATTAATGACTTTGTTAGTATTAGTTTTACAA
CCTCCAATGGCTTTTGCTGTTACCAAAGGAAAGATGGTAACAGTTTTGAGCGTTGATGGA
GGTGGAATTAGAGGCATTATTCCTGGCACCGTTCTTGCCTTCCTTGAATCCAAACTTCAG
GAACTGGATGGACCAAACGCAAGACTTGCAGATTATTTTGATGTGGTAGCAGGAACAAGC
ACAGGTGGATTAATAACTACTATGCTTACTGCTCCTAACAAGGACAACCGCCCCTTATAT
CAAGCAAAAGACATATCCAATTTCTATATGGAGCACGGCCCTCAAATTTTTCCTCAAAGC
AGGCGTAACAGCTTCGTGAGGAGGGTCACAAATTTGTTTGGGGGGCCAAAGTATGATGGC
AAGTACTTGAGATCAATAATTAATTCAATATTAGGCAATCTTACTATGAAGCAGACATTG
ACTAATACAATCATACCAACTTTTGATATCAAACGCCTTCAACCAATTATCTTCAGTACC
GCAGATGCAAAAGCAAATATATCTAAGAATGCTCAATTGTCAGACATTTGTCTTAGCACC
TCGGCTGCACCCACCTATTTTCCAGTACACTATTTTGAGACCAAGGATGCTGAAGGGAAA
ACACGCACGTTTGATCTTGTCGATGGAGGTTTAGCTGCAAATAATCCAACTCTGATGGCA
ATGACTCACATTTCAAAACAAATAATGACGGGCAACTTTCAATACGAGGATATGGAAAAA
ATGGACTGCAAGAAAGTGTTGGTTCTGTCATTGGGCACGGGTACAGGAAAGCACGAAGAG
AAGTACAATGCTACAATAGCTTCCAGATGGGGAATGCTAGGTTGGATCTATAACAATGGT
GCCACCCCATTGATAGATGTTTATGCTGATGCTAGTGCTGATATGGTAGACATTCACGTT
TCCACCATGTTTCAGACTCTTGCCAGTGAGAAGAACTACATCAGGATTCAGGACGACAAT
TTGACTGGAGAGGCTGCGTCTATGGATATTGCAACCATAGAAAACATGGGGAGACTTGTA
CAAATTGGTAATGATCTATTGAAGAAGCCAGTGTCAAGGGTCAACTTAGAAACAGGCCGA
TACGAACCAGTTGTTGCGGAGGGCACTAACGAAGCTGCTATAATCCGTTTTGCTCAGTTG
CTTTCAGAAGAAAGGAAACTCAGATTAAACAACTAG

Peptide Sequence

PEP ID

XP_016446256.1
PEP Infomation

PREDICTED: patatin-like protein 3 [Nicotiana tabacum]
Sequence

MGRIALVAAALMTLLVLVLQPPMAFAVTKGKMVTVLSVDGGGIRGIIPGTVLAFLESKLQ
ELDGPNARLADYFDVVAGTSTGGLITTMLTAPNKDNRPLYQAKDISNFYMEHGPQIFPQS
RRNSFVRRVTNLFGGPKYDGKYLRSIINSILGNLTMKQTLTNTIIPTFDIKRLQPIIFST
ADAKANISKNAQLSDICLSTSAAPTYFPVHYFETKDAEGKTRTFDLVDGGLAANNPTLMA
MTHISKQIMTGNFQYEDMEKMDCKKVLVLSLGTGTGKHEEKYNATIASRWGMLGWIYNNG
ATPLIDVYADASADMVDIHVSTMFQTLASEKNYIRIQDDNLTGEAASMDIATIENMGRLV
QIGNDLLKKPVSRVNLETGRYEPVVAEGTNEAAIIRFAQLLSEERKLRLNN

Transcript Sequence

Gene sequence data has not been registered.